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Kodiak Pumpkin Muffins (High Protein)

These high-protein Kodiak Pumpkin Muffins bake in about 30 minutes, and lean on Kodiak protein pancake mix to pack in 8 grams of protein and 3 grams of fiber per muffin without sacrificing that cozy pumpkin-spice flavor. As a dietitian, I’m all about recipes that hit the sweet spot between nutrition and flavor—and these deliver on both fronts, whether you’re a pumpkin superfan or just pumpkin-curious like me.

If you want more hearty muffins, try my Whole Wheat Blueberry Muffins or my Healthy Morning Glory Muffins – both are high in fiber and packed with nutrition.

Golden-brown Kodiak pumpkin muffins on a baking tray

Recipe Highlights

  • Protein-Packed: Thanks to Kodiak Cakes mix and Greek yogurt, these muffins are a satisfying, protein-rich option for busy mornings or post-workout snacks.
  • Fiber-Filled: Pumpkin puree and high-fiber Kodiak mix provide 4 grams of fiber per muffin.
  • Low in Sugar: With brown sugar being optional, these muffins can be tailored to your preferred sweetness level.

Ingredient Notes

Ingredients for high protein Kodiak pumpkin muffins arranged on a cooling rack
  • Kodiak Cakes Buttermilk Flapjack and Waffle Mix: Provides the base which is a mix of whole grain flour and protein powder. You can buy it on Amazon here.
  • Canned pumpkin puree: Adds moisture, a little sweetness to the flavor, and fiber
  • Brown sugar: Lightly sweetens the muffins and keeps the moisture locked in. I use less brown sugar here than most pumpkin muffin recipes.
  • Greek yogurt: More protein and helps lock in the moisture of the muffins. Protein powder in the pancake mix can be dry, so lots of wet ingredients are key in this recipe.
  • Chocolate chips: An optional mix-in, but I love the chocolate + pumpkin combo

How to Make High Protein Kodiak Pumpkin Muffins

1. Preheat your oven to 350°F and line a muffin tin with paper liners or spray with nonstick cooking spray.

2. In a large bowl, combine the Kodiak Cakes mix, pumpkin pie spice, cinnamon, and baking powder (if using). Stir until well mixed.

3. In a separate bowl, whisk together the wet ingredients: pumpkin puree, eggs, milk, brown sugar, Greek yogurt, and vanilla extract until smooth.

4. Gradually mix the wet ingredients into the dry ingredients. Stir until just combined; avoid overmixing.

5. Fold in chocolate chips.

6. Portion batter: Divide the batter evenly among the muffin tin cups, filling each about 3/4 full.

Kodiak pumpkin muffin batter portioned into a muffin tin

7. Bake for 18–22 minutes, or until a toothpick inserted into the center of a muffin comes out clean.

8. Let the muffins cool in the tin for 5 minutes, then transfer to a wire rack to cool completely.

Tips from the Test Kitchen

  • Don’t Overmix: Pancake mix is already fluffy—stir just enough to combine the ingredients.
  • Use Full-Fat Greek Yogurt: For the creamiest, most moist muffins.
  • Test for Doneness: Insert a toothpick into the center of a muffin; if it comes out clean, they’re ready!
Chocolate chip Kodiak pumpkin muffin showing its soft center
Golden-brown Kodiak pumpkin muffins on a baking tray

Kodiak Pumpkin Muffins

As a dietitian, I’m all about creating recipes that strike the perfect balance between nutrition and flavor—and these deliver on both fronts. These high protein Kodiak Pumpkin Muffins are packed with protein, fiber, and cozy fall spices that make them a hit whether you’re a pumpkin superfan or just pumpkin-curious like me. Made with Kodiak protein pancake mix and simple pantry ingredients, this 30-minute muffin recipe is my go-to for healthy fall baking.
Print Pin Rate
Course: Breakfast, meal prep, Snack
Cuisine: American
Diet: Diabetic, , , , Low Calorie
Prep Time: 10 minutes
Cook Time: 20 minutes
Cool time: 5 minutes
Total Time: 35 minutes
Servings: 12
Calories: 215kcal
Author: Caroline Thomason

Ingredients

Optional Mix in

  • 2 cups Kodiak Cakes Buttermilk Flapjack and Waffle Mix
  • 1 teaspoon pumpkin pie spice
  • 1 teaspoon cinnamon
  • 1 teaspoon baking powder
  • ½ teaspoon baking soda

Wet Ingredients

  • 1 cup canned pumpkin puree
  • 1/2 cup Greek yogurt
  • 2 large eggs
  • 1/2 cup milk
  • 1/3 cup brown sugar
  • ¼ avocado oil
  • 1 teaspoon vanilla extract

Dry Ingredients

  • 2/3 cup chocolate chips

Instructions

  • Set the oven to 350°F and prep your muffin tin with liners or cooking spray.
  • Combine Kodiak Cakes mix, spices, and baking powder and baking soda in a large bowl.
  • In another bowl, whisk together pumpkin puree, eggs, milk, brown sugar (if using), Greek yogurt, and vanilla extract.
  • Slowly mix the wet ingredients into the dry mixture, being careful not to over mix.
  • Fold in dark chocolate chips, nuts, or any optional toppings.
  • Spray muffin tin with oil or fill with muffin liners. Fill muffin cups 3/4 full. I like to use a cookie scoop for more of a standardized scoop.
  • Bake at 350 degrees F for 18–22 minutes, or until a toothpick comes out clean.
  • Let muffins cool for 5 minutes in the tin, then transfer to a wire rack.

Notes

  • Store in an airtight container for up to 2 days or keep in the fridge for up to a week.
  • You can freeze muffins in a sealed container for up to 3 months. Reheat individually in the microwave or let thaw overnight in the fridge.

Nutrition

Serving: 1muffin | Calories: 215kcal | Carbohydrates: 27g | Protein: 8g | Fat: 9g | Saturated Fat: 3g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 4g | Cholesterol: 36mg | Sodium: 165mg | Potassium: 195mg | Fiber: 3g | Sugar: 14g | Vitamin A: 347IU | Vitamin C: 1mg | Calcium: 135mg | Iron: 1.2mg

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